Livestock Studies
2020, Vol 60, Num, 2 (Pages: 68-73)
Evaluation of two SNP markers in DPPA2 and SYTL3 genes for association with host response against Visna/Maedi infection in Turkish sheep
Yalçın Yaman 1
1 Sheep Breeding and Research Institute Bandirma, Balikesir, Turkey
DOI :
10.46897/livestockstudies.846425
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Visna/maedi (VM) is an incurable viral disease of sheep causing serious production
losses across the globe. Classical control measures against VM such as screening
and culling are costly and time-consuming. Breeding VM resistant sheep could
provide an opportunity for struggling with the VM and decreasing the economic
loss. In this study, we aimed to investigate possible associations between two previously
reported single nucleotide polymorphisms (SNPs) in the ovine DPPA2 and
SYTL3 genes and VM serostatus, and evaluate implementation of selective breeding
strategies against VM in Karacabey merino, Kivircik, Imroz, and composite
breeds; Bandirma, Hampshire crosses (HAMP), Ramlic and Black-headed German
mutton crosses (SBA) which are reared in Marmara region of Turkey. For this purpose,
we genotyped the sheep which VM serostatus were determined previously.
The genotyping results showed that these SNPs in the DPPA2 and SYTL3 genes are
polymorphic. We have conducted an association analysis with an experimental
design using case-control matched pairs. Finally, a power analysis was performed
to determine the power of the statistical analysis. According to our findings, within
our detection limits (the minimum odds ratio 2.5 to 2.8; CI 95; statistical power
0.96; p-value < 0.05), there was no significant association between the SNPs in the
DPPA2 and SYTL3 genes and VM serostatus. Therefore, these SNP markers are not
useful to selective breeding against VM in Turkish sheep.
Keywords :
Visna/maedi, Genetic association, Genetic resistance/susceptibility